An Efficient Shared-memory Parallel Sinkhorn-Knopp Algorithm to Compute the Word Mover's Distance
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The Word Mover's Distance (WMD) is a metric that measures the semantic dissimilarity between two text documents by computing the cost of moving all words of a source/query document to the most similar words of a target document optimally. Computing WMD between two documents is costly because it requires solving an optimization problem that costs O(V^3log(V)) where d is the number of unique words in the document. Fortunately, the WMD can be framed as the Earth Mover's Distance (EMD) (also known as the Optimal Transportation Distance) for which it has been shown that the algorithmic complexity can be reduced to O(V^2) by adding an entropy penalty to the optimization problem and a similar idea can be adapted to compute WMD efficiently. Additionally, the computation can be made highly parallel by computing WMD of a single query document against multiple target documents at once (e.g., finding whether a given tweet is similar to any other tweets happened in a day). In this paper, we present a shared-memory parallel Sinkhorn-Knopp Algorithm to compute the WMD of one document against many other documents by adopting the O(V^2) EMD algorithm. We used algorithmic transformations to change the original dense compute-heavy kernel to a sparse compute kernel and obtained 67× speedup using 96 cores on the state-of-the-art of Intel 4-sockets Cascade Lake machine w.r.t. its sequential run. Our parallel algorithm is over 700× faster than the naive parallel python code that internally uses optimized matrix library calls.
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