research
∙
09/18/2022
GenPIP: In-Memory Acceleration of Genome Analysis via Tight Integration of Basecalling and Read Mapping
Nanopore sequencing is a widely-used high-throughput genome sequencing t...
share
research
∙
06/14/2022
COVIDHunter: COVID-19 pandemic wave prediction and mitigation via seasonality-aware modeling
Early detection and isolation of COVID-19 patients are essential for suc...
research
∙
05/12/2022
SeGraM: A Universal Hardware Accelerator for Genomic Sequence-to-Graph and Sequence-to-Sequence Mapping
A critical step of genome sequence analysis is the mapping of sequenced ...
research
∙
02/21/2022
GenStore: A High-Performance and Energy-Efficient In-Storage Computing System for Genome Sequence Analysis
Read mapping is a fundamental, yet computationally-expensive step in man...
research
∙
12/30/2021
GenShare: Sharing Accurate Differentially-Private Statistics for Genomic Datasets with Dependent Tuples
Motivation: Cutting the cost of DNA sequencing technology led to a quant...
research
∙
06/09/2021
Near-Optimal Privacy-Utility Tradeoff in Genomic Studies Using Selective SNP Hiding
Motivation: Researchers need a rich trove of genomic datasets that they ...
research
∙
02/06/2021